STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SriSorcin. (195 aa)    
Predicted Functional Partners:
Sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.870
Fech
Ferrochelatase.
   
    0.865
Ryr2
Ryanodine receptor 2, cardiac.
    
 
 0.837
ENSMSIP00000003902
annotation not available
   
    0.805
ENSMSIP00000020620
annotation not available
   
    0.805
Mkrn3
Makorin, ring finger protein, 3.
   
    0.805
Psen2
Presenilin 2.
    
 
 0.787
ENSMSIP00000022739
annotation not available
   
 0.748
ENSMSIP00000022747
annotation not available
   
 0.748
Cast
Calpastatin.
   
 0.748
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.