STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000028183annotation not available (313 aa)    
Predicted Functional Partners:
Cwc25
CWC25 spliceosome-associated protein.
   
 0.995
Dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.991
ENSMSIP00000009551
annotation not available
    
 0.990
Xab2
XPA binding protein 2.
    
 0.990
Isy1
ISY1 splicing factor homolog.
    
 0.990
Snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 0.990
Syf2
SYF2 homolog, RNA splicing factor (S. cerevisiae).
    
 0.989
Rbm22
RNA binding motif protein 22.
   
 0.987
Prpf8
pre-mRNA processing factor 8.
    
 0.987
Prpf19
pre-mRNA processing factor 19.
    
 0.986
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.