STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r16aProtein phosphatase 1, regulatory subunit 16A. (524 aa)    
Predicted Functional Partners:
Ppp1cb
Protein phosphatase 1 catalytic subunit beta.
   
 0.903
ENSMSIP00000014859
annotation not available
   
 0.856
ENSMSIP00000004756
annotation not available
   
 0.845
ENSMSIP00000009905
annotation not available
   
 0.845
Ppp1ca
Protein phosphatase 1 catalytic subunit alpha.
   
 0.843
ENSMSIP00000024937
annotation not available
   
 0.843
Dnajc7
DnaJ heat shock protein family (Hsp40) member C7.
    
 
 0.793
ENSMSIP00000019357
annotation not available
    
 
 0.626
ENSMSIP00000028136
annotation not available
     
 0.613
ENSMSIP00000029156
annotation not available
   
 
 0.568
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.