STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SgtaSmall glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha. (314 aa)    
Predicted Functional Partners:
Ubl4a
Ubiquitin-like 4A.
   
 0.997
Bag6
BCL2-associated athanogene 6.
   
 0.995
Get4
Golgi to ER traffic protein 4.
   
 0.991
Ubl4b
Ubiquitin-like 4B.
   
 0.977
Clpb
ClpB caseinolytic peptidase B.
  
 0.970
ENSMSIP00000035691
annotation not available
    
 0.967
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
 0.967
Hsph1
Heat shock 105kDa/110kDa protein 1.
  
 0.964
Asna1
arsA arsenite transporter, ATP-binding, homolog 1 (bacterial).
   
 0.935
Rad23a
RAD23 homolog A, nucleotide excision repair protein.
   
 0.925
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.