STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000029675annotation not available (91 aa)    
Predicted Functional Partners:
Cngb1
Cyclic nucleotide gated channel beta 1.
   
 0.997
Cngb3
Cyclic nucleotide gated channel beta 3.
 
 
 0.985
Cnga4
Cyclic nucleotide gated channel alpha 4.
 
   
 0.949
Pex5l
Peroxisomal biogenesis factor 5-like.
     
 0.935
Cnga2
Cyclic nucleotide gated channel alpha 2.
 
   
  0.925
Cnga3
Cyclic nucleotide gated channel alpha 3.
 
  
  0.868
Calm4
Calmodulin 4.
     
 0.864
Calml3
Calmodulin-like 3.
     
 0.863
ENSMSIP00000002109
annotation not available
     
 0.825
ENSMSIP00000008772
annotation not available
     
 0.825
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.