STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrrc45Leucine rich repeat containing 45. (670 aa)    
Predicted Functional Partners:
Anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
    0.893
Actg1
Actin, gamma, cytoplasmic 1.
    
  0.887
Myo6
Myosin VI.
    
  0.868
Myo1f
Myosin IF.
   
 
 0.867
Rac3
Rac family small GTPase 3.
 
   
  0.865
ENSMSIP00000037903
annotation not available
     
  0.865
ENSMSIP00000038490
annotation not available
    
  0.789
Cntln
Centlein, centrosomal protein.
      
 0.769
Cep250
Centrosomal protein 250.
   
 
 0.746
Pak6
P21 (RAC1) activated kinase 6.
    
  0.656
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.