STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ly6aLymphocyte antigen 6 complex, locus A. (134 aa)    
Predicted Functional Partners:
Ly6e
Lymphocyte antigen 6 complex, locus E.
   
  
 0.723
Kit
KIT proto-oncogene receptor tyrosine kinase.
      
 0.622
ENSMSIP00000034804
annotation not available
      
 0.621
Lck
Lymphocyte protein tyrosine kinase.
      
 0.618
Cd34
CD34 antigen.
      
 0.613
ENSMSIP00000029229
annotation not available
      
 0.610
Pecam1
Platelet/endothelial cell adhesion molecule 1.
      
 0.603
Slurp1
Secreted Ly6/Plaur domain containing 1.
      
 0.602
Lynx1
Ly6/neurotoxin 1.
      
 0.592
Thy1
Thymus cell antigen 1, theta.
      
 0.591
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.