Pfdn5 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Pfdn5

Prefoldin 5. (154 aa)

Predicted Functional Partners:

Pfdn6

0.998

Vbp1

0.998

ENSMSIP00000018908

0.998

ENSMSIP00000035964

0.998

Pfdn4

0.997

ENSMSIP00000028845

0.997

Cct2

0.901

Cct3

0.901

ENSMSIP00000000621

0.892

ENSMSIP00000000643

0.892

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cct2	Cct3	ENSMSIP00000010591	ENSMSIP00000035234	Chaperonin containing Tcp1, subunit 2 (beta).	Chaperonin containing Tcp1, subunit 3 (gamma).	0.999
Cct2	ENSMSIP00000000621	ENSMSIP00000010591	ENSMSIP00000000621	Chaperonin containing Tcp1, subunit 2 (beta).	annotation not available	0.999
Cct2	ENSMSIP00000000643	ENSMSIP00000010591	ENSMSIP00000000643	Chaperonin containing Tcp1, subunit 2 (beta).	annotation not available	0.999
Cct2	ENSMSIP00000018908	ENSMSIP00000010591	ENSMSIP00000018908	Chaperonin containing Tcp1, subunit 2 (beta).	annotation not available	0.860
Cct2	ENSMSIP00000028845	ENSMSIP00000010591	ENSMSIP00000028845	Chaperonin containing Tcp1, subunit 2 (beta).	annotation not available	0.946
Cct2	ENSMSIP00000035964	ENSMSIP00000010591	ENSMSIP00000035964	Chaperonin containing Tcp1, subunit 2 (beta).	annotation not available	0.916
Cct2	Pfdn4	ENSMSIP00000010591	ENSMSIP00000004445	Chaperonin containing Tcp1, subunit 2 (beta).	Prefoldin 4.	0.900
Cct2	Pfdn5	ENSMSIP00000010591	ENSMSIP00000030580	Chaperonin containing Tcp1, subunit 2 (beta).	Prefoldin 5.	0.901
Cct2	Pfdn6	ENSMSIP00000010591	ENSMSIP00000014491	Chaperonin containing Tcp1, subunit 2 (beta).	Prefoldin subunit 6.	0.860
Cct2	Vbp1	ENSMSIP00000010591	ENSMSIP00000018848	Chaperonin containing Tcp1, subunit 2 (beta).	Von Hippel-Lindau binding protein 1.	0.935
Cct3	Cct2	ENSMSIP00000035234	ENSMSIP00000010591	Chaperonin containing Tcp1, subunit 3 (gamma).	Chaperonin containing Tcp1, subunit 2 (beta).	0.999
Cct3	ENSMSIP00000000621	ENSMSIP00000035234	ENSMSIP00000000621	Chaperonin containing Tcp1, subunit 3 (gamma).	annotation not available	0.999
Cct3	ENSMSIP00000000643	ENSMSIP00000035234	ENSMSIP00000000643	Chaperonin containing Tcp1, subunit 3 (gamma).	annotation not available	0.999
Cct3	ENSMSIP00000018908	ENSMSIP00000035234	ENSMSIP00000018908	Chaperonin containing Tcp1, subunit 3 (gamma).	annotation not available	0.824
Cct3	ENSMSIP00000028845	ENSMSIP00000035234	ENSMSIP00000028845	Chaperonin containing Tcp1, subunit 3 (gamma).	annotation not available	0.926
Cct3	ENSMSIP00000035964	ENSMSIP00000035234	ENSMSIP00000035964	Chaperonin containing Tcp1, subunit 3 (gamma).	annotation not available	0.922
Cct3	Pfdn4	ENSMSIP00000035234	ENSMSIP00000004445	Chaperonin containing Tcp1, subunit 3 (gamma).	Prefoldin 4.	0.898
Cct3	Pfdn5	ENSMSIP00000035234	ENSMSIP00000030580	Chaperonin containing Tcp1, subunit 3 (gamma).	Prefoldin 5.	0.901
Cct3	Pfdn6	ENSMSIP00000035234	ENSMSIP00000014491	Chaperonin containing Tcp1, subunit 3 (gamma).	Prefoldin subunit 6.	0.824
Cct3	Vbp1	ENSMSIP00000035234	ENSMSIP00000018848	Chaperonin containing Tcp1, subunit 3 (gamma).	Von Hippel-Lindau binding protein 1.	0.920