STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwh43Cell wall biogenesis 43 C-terminal homolog. (699 aa)    
Predicted Functional Partners:
Cfap43
Cilia and flagella associated protein 43.
      
 0.548
Kif18a
Kinesin family member 18A.
      
 0.538
Baiap2l1
BAI1-associated protein 2-like 1.
      
 0.538
Ccdc39
Coiled-coil domain containing 39.
      
 0.535
Tmem200b
Transmembrane protein 200B.
      
 0.535
Prrg2
Proline-rich Gla (G-carboxyglutamic acid) polypeptide 2.
      
 0.535
Brca2
Breast cancer 2, early onset.
      
 0.533
ENSMSIP00000013255
annotation not available
      
 0.526
Hepacam
Hepatocyte cell adhesion molecule.
      
 0.526
Zbtb39
Zinc finger and BTB domain containing 39.
      
 0.525
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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