STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf14Ring finger protein 14. (485 aa)    
Predicted Functional Partners:
ENSMSIP00000019615
annotation not available
    
 
 0.935
Gspt2
G1 to S phase transition 2.
   
 
 0.691
Rnf6
Ring finger protein (C3H2C3 type) 6.
    
 
 0.599
Ncoa4
Nuclear receptor coactivator 4.
      
 0.598
Zfp414
Zinc finger protein 414.
      
 0.592
Atp5o
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit.
    
   0.571
Fbxw2
F-box and WD-40 domain protein 2.
   
  
 0.570
Atg7
Autophagy related 7.
     
 0.552
Tgfb1i1
Transforming growth factor beta 1 induced transcript 1.
      
 0.550
Sec22a
SEC22 homolog A, vesicle trafficking protein.
      
 0.544
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.