STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rrp1Ribosomal RNA processing 1 homolog (S. cerevisiae). (495 aa)    
Predicted Functional Partners:
Rrp15
Ribosomal RNA processing 15 homolog (S. cerevisiae).
   
 0.998
Brix1
BRX1, biogenesis of ribosomes.
   
 0.998
Nip7
NIP7, nucleolar pre-rRNA processing protein.
   
 0.998
Ddx18
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
   
 0.998
Rpf1
Ribosome production factor 1 homolog.
   
 0.998
Rsl1d1
Ribosomal L1 domain containing 1.
   
 0.998
Wdr12
WD repeat domain 12.
   
 0.998
Ebna1bp2
EBNA1 binding protein 2.
   
 0.998
Gtpbp4
GTP binding protein 4.
   
 0.998
Mak16
MAK16 homolog.
   
 0.998
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.