STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gja1Gap junction protein, alpha 1. (382 aa)    
Predicted Functional Partners:
Tjp1
Tight junction protein 1.
   
 0.998
Src
Rous sarcoma oncogene.
    
 0.992
Gja5
Gap junction protein, alpha 5.
    
0.989
Nedd4
Neural precursor cell expressed, developmentally down-regulated 4.
    
 0.987
Mapk3
Mitogen-activated protein kinase 3.
    
 0.974
Gjc1
Gap junction protein, gamma 1.
    
0.973
Gja4
Gap junction protein, alpha 4.
     
0.964
Gja8
Gap junction protein, alpha 8.
  
 
0.957
Gjb2
Gap junction protein, beta 2.
  
 
0.956
Gjb6
Gap junction protein, beta 6.
    
0.955
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.