STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf157Ring finger protein 157. (749 aa)    
Predicted Functional Partners:
Atrnl1
Attractin like 1.
   
 
 0.710
Megf8
Multiple EGF-like-domains 8.
   
 
 0.657
Uba3
Ubiquitin-like modifier activating enzyme 3.
     
 0.632
ENSMSIP00000033217
annotation not available
      
 0.613
Atrn
Attractin.
   
 
 0.582
ENSMSIP00000015996
annotation not available
      
 0.544
ENSMSIP00000026150
annotation not available
      
 0.539
Csrnp3
Cysteine-serine-rich nuclear protein 3.
      
 0.535
ENSMSIP00000012270
annotation not available
      
 0.527
Lhfpl4
Lipoma HMGIC fusion partner-like protein 4.
      
 0.527
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.