STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Npepl1Aminopeptidase-like 1. (524 aa)    
Predicted Functional Partners:
Cbs
Cystathionine beta-synthase.
   
 0.726
Got2
Glutamatic-oxaloacetic transaminase 2, mitochondrial.
    
 0.713
Nfs1
Nitrogen fixation gene 1 (S. cerevisiae).
  
 
 0.683
Scly
Selenocysteine lyase.
  
 
 0.683
ENSMSIP00000016003
annotation not available
  
 
 0.653
Cndp2
CNDP dipeptidase 2 (metallopeptidase M20 family).
  
 
 0.653
Rimkla
Ribosomal modification protein rimK-like family member A.
   
 
 0.646
Rimklb
Ribosomal modification protein rimK-like family member B.
   
 
 0.646
Dck
Deoxycytidine kinase.
    
 0.616
Cep97
Centrosomal protein 97.
    
 0.616
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.