STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1051 aa)    
Predicted Functional Partners:
Baz2a
Bromodomain adjacent to zinc finger domain, 2A.
    
 0.999
Baz1b
Bromodomain adjacent to zinc finger domain, 1B.
   
 0.999
Baz1a
Bromodomain adjacent to zinc finger domain 1A.
    
 0.998
Rsf1
Remodeling and spacing factor 1.
   
 0.996
Pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.992
Cecr2
CECR2, histone acetyl-lysine reader.
    
 0.991
Bptf
Bromodomain PHD finger transcription factor.
   
 0.991
Chrac1
Chromatin accessibility complex 1.
    
 0.990
Rbbp7
Retinoblastoma binding protein 7, chromatin remodeling factor.
   
 0.984
ENSMSIP00000002165
annotation not available
   
 0.982
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.