STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000033780annotation not available (163 aa)    
Predicted Functional Partners:
Apaf1
Apoptotic peptidase activating factor 1.
   
 0.859
Arid4a
AT rich interactive domain 4A (RBP1-like).
    
  0.831
Arid4b
AT rich interactive domain 4B (RBP1-like).
    
  0.831
Pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.815
Smn1
Survival motor neuron 1.
    
 0.739
Fancm
Fanconi anemia, complementation group M.
    
 0.732
ENSMSIP00000010441
annotation not available
   
  0.714
Ndufa12
NADH:ubiquinone oxidoreductase subunit A12.
   
  0.714
Ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
   
  0.714
Ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
   
  0.713
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.