STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dipk1bDivergent protein kinase domain 1B. (431 aa)    
Predicted Functional Partners:
4930402H24Rik
RIKEN cDNA 4930402H24 gene.
      
 0.634
ENSMSIP00000019184
annotation not available
      
 0.618
Surf6
Surfeit gene 6.
      
 0.602
Snapc4
Small nuclear RNA activating complex, polypeptide 4.
      
 0.602
2610301B20Rik
RIKEN cDNA 2610301B20 gene.
      
 0.549
Lcn6
Lipocalin 6.
      
 0.547
Ak8
Adenylate kinase 8.
      
 0.546
Mrps2
Mitochondrial ribosomal protein S2.
      
 0.538
Pmpca
Peptidase (mitochondrial processing) alpha.
      
 0.535
Chpf
Chondroitin polymerizing factor.
      
 0.527
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.