STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scg3Secretogranin III. (468 aa)    
Predicted Functional Partners:
Chga
Chromogranin A.
   
  
 0.740
Chgb
Chromogranin B.
   
  
 0.719
Fam20c
Family with sequence similarity 20, member C.
    
  0.699
Trpa1
Transient receptor potential cation channel, subfamily A, member 1.
      
 0.686
Cpe
Carboxypeptidase E.
   
  
 0.685
Scg2
Secretogranin II.
   
  
 0.650
Scg5
Secretogranin V.
   
  
 0.623
Pcsk1n
Proprotein convertase subtilisin/kexin type 1 inhibitor.
   
  
 0.593
Stmn3
Stathmin-like 3.
   
    0.521
Ptprn2
Protein tyrosine phosphatase, receptor type, N polypeptide 2.
   
  
 0.504
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.