STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cep128Centrosomal protein 128. (1132 aa)    
Predicted Functional Partners:
Ccdc68
Coiled-coil domain containing 68.
     
 0.969
Cntrl
Centriolin.
    
 0.964
Nin
Ninein.
    
 0.960
Odf2
Outer dense fiber of sperm tails 2.
    
 0.950
Cep170
Centrosomal protein 170.
    
 0.945
Cep170b
Centrosomal protein 170B.
    
 0.929
Odf2l
Outer dense fiber of sperm tails 2-like.
    
 0.897
Ccdc61
Coiled-coil domain containing 61.
    
  0.887
Dctn1
Dynactin 1.
     
 0.875
Npy4r
Neuropeptide Y receptor Y4.
    
  0.849
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.