STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg10Autophagy related 10. (211 aa)    
Predicted Functional Partners:
Atg12
Autophagy related 12.
    
 0.999
Atg7
Autophagy related 7.
   
 0.999
Atg5
Autophagy related 5.
    
 0.954
Irgm1
Immunity-related GTPase family M member 1.
    
 
 0.900
Atg13
Autophagy related 13.
      
 0.857
Atg16l1
Autophagy related 16-like 1 (S. cerevisiae).
     
 0.853
Atg3
Autophagy related 3.
    
 
 0.822
Atg4b
Autophagy related 4B, cysteine peptidase.
    
 
 0.716
Map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.715
ENSMSIP00000003580
annotation not available
   
 0.704
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.