STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Itga4Integrin alpha 4. (1032 aa)    
Predicted Functional Partners:
Itgb1
Integrin beta 1 (fibronectin receptor beta).
   
 0.999
Itgb7
Integrin beta 7.
   
 0.999
Vcam1
Vascular cell adhesion molecule 1.
   
 0.997
Itgb2
Integrin beta 2.
   
 0.994
Pxn
Paxillin.
    
 0.990
Itgb2l
Integrin beta 2-like.
   
 0.981
Itgb3
Integrin beta 3.
   
 0.979
Itgb8
Integrin beta 8.
    
 0.967
Itgb6
Integrin beta 6.
   
 0.962
Itgb5
Integrin beta 5.
   
 0.962
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.