STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kdm5aLysine (K)-specific demethylase 5A. (1690 aa)    
Predicted Functional Partners:
Atp5d
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit.
  
 0.991
Atp5o
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit.
  
 0.991
Atp5c1
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1.
  
 0.991
Atp5a1
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1.
  
 0.991
ENSMSIP00000006396
annotation not available
   
 0.955
Ash2l
ASH2 like histone lysine methyltransferase complex subunit.
    
 0.946
Kdm2b
Lysine (K)-specific demethylase 2B.
   
 0.941
Suz12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.938
Eed
Embryonic ectoderm development.
    
 0.936
Kdm2a
Lysine (K)-specific demethylase 2A.
   
 0.924
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.