STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_11778Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
meaf6
Chromatin modification-related protein MEAF6.
    
 0.784
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.701
swc4
SWR1-complex protein 4.
    
 0.620
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.610
Kat8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.610
mst1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.610
Kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.610
A0J61_00858
Uncharacterized protein.
    
 0.576
hus5
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.565
taf2
Transcription initiation factor TFIID subunit 2.
    
 0.564
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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