STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICL1_0Isocitrate lyase. (194 aa)    
Predicted Functional Partners:
acu-9
Malate synthase; Belongs to the malate synthase family.
 
 
 0.948
cit-1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.935
ACON
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.907
acoA
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.906
A0J61_02318
Uncharacterized protein.
  
 0.905
AGX1
Alanine--glyoxylate aminotransferase 1.
  
 
 0.894
A0J61_07742
Putative pyruvate decarboxylase C3G9.11c.
    
 0.793
ILV2
Acetolactate synthase.
  
 
 0.782
gaaC
L-threo-3-deoxy-hexylosonate aldolase; Belongs to the DapA family.
   
 
  0.764
LEU1
3-isopropylmalate dehydratase.
  
 
 0.757
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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