STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_11695Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
A0J61_01470
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c.
    
 0.757
TONSL
Tonsoku-like protein.
   
 0.698
GDE1
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.673
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
    
  0.660
Eci2
Enoyl-CoA delta isomerase 2, mitochondrial.
    
  0.660
ucp7_0
UBA domain-containing protein 7.
    
 0.644
ucp7_1
UBA domain-containing protein 7.
    
 0.644
TRAF7
E3 ubiquitin-protein ligase TRAF7.
    
 0.628
apm2
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
  0.595
PLA2G4A
Lysophospholipase.
    
 0.587
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.