STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_11241CCHC-type domain-containing protein. (145 aa)    
Predicted Functional Partners:
mph1_1
ATP-dependent DNA helicase mph1.
    
 0.906
ssb2_1
Replication factor A protein 2.
    
 0.600
ssb2_0
Replication factor A protein 2.
    
 0.600
A0J61_05790
CENP-T_C domain-containing protein.
    
  0.577
A0J61_09576
Uncharacterized protein.
    
  0.539
A0J61_08334
Uncharacterized protein.
    
  0.539
Obfc1
CST complex subunit STN1.
    
  0.519
Caf1
Putative histone-binding protein Caf1.
    
 0.498
Rbbp4_0
Histone-binding protein RBBP4.
    
 0.498
Rbbp4_1
Histone-binding protein RBBP4.
    
 0.498
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.