STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
His2AvHistone H2A; Belongs to the histone H2A family. (132 aa)    
Predicted Functional Partners:
SWR1
Helicase SWR1.
    
 0.993
RPH1
DNA damage-responsive transcriptional repressor RPH1.
    
 0.989
ruvbl1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.983
HHT1
Histone H3; Belongs to the histone H3 family.
 
 
 0.983
H3.1
Histone H3; Belongs to the histone H3 family.
 
 
 0.983
HTB1_0
Histone H2B; Belongs to the histone H2B family.
 
 
 0.974
VPS72
Vacuolar protein sorting-associated protein 72.
    
 
 0.974
HTB1_1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.974
vps71_1
SWR1 complex subunit vps71.
    
 
 0.964
ARP6
Actin-like protein ARP6; Belongs to the actin family.
   
 
 0.963
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.