Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0J61_10512 | GDE1 | A0A1C7MYG2 | A0A1C7NPF3 | Uncharacterized protein. | Glycerophosphodiester phosphodiesterase GDE1. | 0.688 |
A0J61_10512 | LYRM4 | A0A1C7MYG2 | A0A1C7NK91 | Uncharacterized protein. | LYR motif-containing protein 4; Belongs to the complex I LYR family. | 0.559 |
A0J61_10512 | MRE11A | A0A1C7MYG2 | A0A1C7NQQ5 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.579 |
A0J61_10512 | PLA2G4A | A0A1C7MYG2 | A0A1C7NLR2 | Uncharacterized protein. | Lysophospholipase. | 0.588 |
A0J61_10512 | RPL21A | A0A1C7MYG2 | A0A1C7MZ43 | Uncharacterized protein. | 60S ribosomal protein L21-A. | 0.591 |
A0J61_10512 | RPS27A | A0A1C7MYG2 | A0A1C7NE82 | Uncharacterized protein. | Ubiquitin-40S ribosomal protein S27a. | 0.605 |
A0J61_10512 | nuc-2 | A0A1C7MYG2 | A0A1C7NCS9 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.698 |
A0J61_10512 | rpl21b | A0A1C7MYG2 | A0A1C7NQP9 | Uncharacterized protein. | 60S ribosomal protein L21-B. | 0.591 |
A0J61_10512 | rrn7 | A0A1C7MYG2 | A0A1C7NDG0 | Uncharacterized protein. | RNA polymerase I-specific transcription initiation factor rrn7. | 0.625 |
A0J61_10512 | tom40 | A0A1C7MYG2 | A0A1C7N9R3 | Uncharacterized protein. | Putative mitochondrial import receptor subunit tom40. | 0.576 |
GDE1 | A0J61_10512 | A0A1C7NPF3 | A0A1C7MYG2 | Glycerophosphodiester phosphodiesterase GDE1. | Uncharacterized protein. | 0.688 |
GDE1 | LYRM4 | A0A1C7NPF3 | A0A1C7NK91 | Glycerophosphodiester phosphodiesterase GDE1. | LYR motif-containing protein 4; Belongs to the complex I LYR family. | 0.548 |
GDE1 | MRE11A | A0A1C7NPF3 | A0A1C7NQQ5 | Glycerophosphodiester phosphodiesterase GDE1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.642 |
GDE1 | PLA2G4A | A0A1C7NPF3 | A0A1C7NLR2 | Glycerophosphodiester phosphodiesterase GDE1. | Lysophospholipase. | 0.829 |
GDE1 | RPS27A | A0A1C7NPF3 | A0A1C7NE82 | Glycerophosphodiester phosphodiesterase GDE1. | Ubiquitin-40S ribosomal protein S27a. | 0.736 |
GDE1 | nuc-2 | A0A1C7NPF3 | A0A1C7NCS9 | Glycerophosphodiester phosphodiesterase GDE1. | Ankyrin repeat protein nuc-2. | 0.944 |
GDE1 | rrn7 | A0A1C7NPF3 | A0A1C7NDG0 | Glycerophosphodiester phosphodiesterase GDE1. | RNA polymerase I-specific transcription initiation factor rrn7. | 0.710 |
LYRM4 | A0J61_10512 | A0A1C7NK91 | A0A1C7MYG2 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.559 |
LYRM4 | GDE1 | A0A1C7NK91 | A0A1C7NPF3 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Glycerophosphodiester phosphodiesterase GDE1. | 0.548 |
LYRM4 | MRE11A | A0A1C7NK91 | A0A1C7NQQ5 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.884 |
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