STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg22Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family. (548 aa)    
Predicted Functional Partners:
A0J61_02737
Uncharacterized protein.
   
 0.813
A0J61_08961
BZIP domain-containing protein.
   
 0.798
CPC-1
Cross-pathway control protein 1.
   
 0.798
GBF1
G-box-binding factor 1.
   
 0.798
A0J61_01364
BZIP domain-containing protein.
   
 0.798
ndc80
Kinetochore protein ndc80.
    
 0.795
mrp10
37S ribosomal protein mrp10, mitochondrial.
    
 0.764
SPAC5D6.12
Uncharacterized protein C5D6.12.
    
 0.764
A0J61_01654
Uncharacterized protein.
    
 0.764
MKP1_0
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.751
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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