Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_09803Uncharacterized protein. (468 aa)    
Predicted Functional Partners:
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.915
culA_0
Cullin-1; Belongs to the cullin family.
    
  0.861
rhlG_1
Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase.
     
 0.706
FLD1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.701
gpi2
Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit.
     
  0.673
DGAT2B_0
Diacylglycerol O-acyltransferase 2B.
   
 
 0.587
DGAT2B_1
Diacylglycerol O-acyltransferase 2B.
   
 
 0.587
A0J61_10275
Uncharacterized protein.
     
 0.583
mch1
Putative transporter mch1.
     
 0.583
Aldh3b1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.568
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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