STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pctA_0Ethanolamine-phosphate cytidylyltransferase. (374 aa)    
Predicted Functional Partners:
A0J61_01467
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.10; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.827
Etnk2
Ethanolamine kinase 2.
     
 0.796
Phospho2
Pyridoxal phosphate phosphatase PHOSPHO2.
     
 0.769
cut6
Acetyl-CoA carboxylase.
    
 0.752
fabD
Malonyl CoA-acyl carrier protein transacylase.
     
 0.750
A0J61_02640
Putative choline kinase 2.
   
 
 0.730
A0J61_00966
Putative choline kinase 2.
   
 
 0.730
B9J10.140
Succinate-CoA ligase subunit beta.
     
 0.726
ACLY
ATP-citrate synthase.
     
 0.725
A0J61_03320
Uncharacterized protein.
     
 0.723
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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