STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sho1_0High osmolarity signaling protein sho1. (161 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2.
    
  0.977
PBS2
MAP kinase kinase PBS2.
    
 0.962
BRO1
Vacuolar protein-sorting protein BRO1.
   
 0.920
vps27_0
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
   
 0.847
vps27_1
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
   
 0.847
A0J61_08386
Uncharacterized protein.
    
 0.846
sst2
AMSH-like protease sst2.
    
 0.837
RPS27A
Ubiquitin-40S ribosomal protein S27a.
   
 0.819
A0J61_09178
Uncharacterized protein.
   
 0.812
FUZ7
Dual specificity protein kinase FUZ7; Belongs to the protein kinase superfamily.
    
 0.809
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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