STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_08554Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
ypt3
GTP-binding protein ypt3.
   
 0.793
Rab11a_1
Ras-related protein Rab-11A.
   
 0.793
YPT3
Ras-related protein YPT3.
   
 0.793
RAB11A
Ras-related protein Rab-11A.
   
 0.793
Rab11a_0
Ras-related protein Rab-11A.
   
 0.793
arpC
Actin-related protein 3; Belongs to the actin family.
   
 0.743
GEM1
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.718
A0J61_04733
Uncharacterized protein.
    
 0.718
A0J61_04864
Uncharacterized protein.
    
 0.718
A0J61_02060
Uncharacterized protein.
    
 0.718
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.