STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_09022Uncharacterized protein. (515 aa)    
Predicted Functional Partners:
TSC10
3-ketodihydrosphingosine reductase TSC10.
    
 0.886
NUDT12
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.810
GDE1
Glycerophosphodiester phosphodiesterase GDE1.
  
 0.810
nuc-2
Ankyrin repeat protein nuc-2.
  
 0.799
PLA2G4A
Lysophospholipase.
   
 
 0.776
A0J61_03041
Uncharacterized protein.
     
 0.765
regA_4
3',5'-cyclic-nucleotide phosphodiesterase regA; Belongs to the cyclic nucleotide phosphodiesterase family.
     
 0.760
GPI8
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.753
NUDT14
Nudix hydrolase 14, chloroplastic.
     
 0.715
A0J61_03519
Phosphatidylglycerol phospholipase C.
  
 
 0.712
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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