STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_08925Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
RABL6
Rab-like protein 6.
   
 
 0.691
ypt1
GTP-binding protein ypt1.
   
 
 0.691
LTP1
Low molecular weight phosphotyrosine protein phosphatase.
     
 0.688
deoD
Purine nucleoside phosphorylase DeoD-type.
    
  0.616
IMH3
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
 0.615
DTYMK
Thymidylate kinase.
    
  0.609
CDA_0
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.605
GOT1
Protein transport protein GOT1.
    
  0.604
etp1
Electron transfer protein 1, mitochondrial.
    
 
 0.600
MFDX1
Adrenodoxin-like protein 1, mitochondrial.
    
 
 0.600
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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