STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_07681Leukotriene A-4 hydrolase. (580 aa)    
Predicted Functional Partners:
trp-3
Tryptophan synthase.
    
 0.828
DUG2
Putative di-and tripeptidase DUG2.
  
 0.744
dug1
Cys-Gly metallodipeptidase dug1.
  
 0.744
tum1
Putative 3-mercaptopyruvate sulfurtransferase.
  
 
 0.731
A0J61_01860
Chorismate mutase.
    
 0.681
shmt2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.669
SHM1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.669
GOT2
Aspartate aminotransferase.
   
 0.664
Got1
Aspartate aminotransferase.
   
 0.664
A0J61_08887
Uncharacterized protein.
   
 0.663
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.