STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_07262Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
TIM22
Mitochondrial import inner membrane translocase subunit TIM22.
    
 0.597
cactin
Cactin.
    
 0.597
SDH4
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.551
sdh4
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.551
A0J61_05422
Uncharacterized protein.
     
 0.497
A0J61_03344
BHLH domain-containing protein.
     
 0.497
tim10_1
Mitochondrial import inner membrane translocase subunit tim10.
   
 0.485
tim10_2
Mitochondrial import inner membrane translocase subunit tim10.
   
 0.485
tim10_0
Mitochondrial import inner membrane translocase subunit tim10.
   
 0.485
TIM9_1
Mitochondrial import inner membrane translocase subunit TIM9.
   
 
 0.464
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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