STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPR3Nitrogen permease regulator 3. (733 aa)    
Predicted Functional Partners:
A0J61_06126
Putative RWD, RING finger and WD repeat-containing protein C11E3.05.
  
 
 0.998
wdr24
WD repeat-containing protein 24.
    
 0.997
A0J61_06504
Nitrogen permease regulator 2.
    
 0.997
MIOS
WD repeat-containing protein mio.
    
 0.992
Kptn
Kaptin.
    
 0.991
A0J61_00592
Uncharacterized protein.
    
 0.985
IML1
Vacuolar membrane-associated protein IML1.
    
 0.985
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.980
Rraga_1
Ras-related GTP-binding protein A.
    
 0.974
SEC13
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.974
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.