STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_05830Zn(2)-C6 fungal-type domain-containing protein. (243 aa)    
Predicted Functional Partners:
pep7
Vacuolar segregation protein pep7.
   
 0.850
gdi1_1
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.810
gdi1_0
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.810
pik3c3
Phosphatidylinositol 3-kinase VPS34.
    
 0.800
vps901_1
Vacuolar protein sorting-associated protein 9a.
    
 0.783
vps901_0
Vacuolar protein sorting-associated protein 9a.
    
 0.783
ANKRD27
Ankyrin repeat domain-containing protein 27.
    
 0.783
AT1_0
Putative long-chain-alcohol O-fatty-acyltransferase 1.
    
 0.783
Vps45
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.772
SAP7_1
Zinc finger A20 and AN1 domain-containing stress-associated protein 7.
   
 0.765
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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