STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSD17B103-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
echs1
Putative enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.967
trm10_1
tRNA (Guanine(9)-N1)-methyltransferase.
    
 0.940
trm10_0
tRNA (Guanine(9)-N1)-methyltransferase.
    
 0.940
A0J61_10664
Putative transporter C11D3.06.
    
 0.863
A0J61_09362
Putative transporter C11D3.06.
    
 0.863
A0J61_02884
Uncharacterized protein.
    
 0.863
SPCC4B3.13
Putative transporter C4B3.13.
    
 0.863
crt
Short-chain-enoyl-CoA hydratase.
   
 0.862
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.829
hbd
3-hydroxybutyryl-CoA dehydrogenase.
   
 
 0.805
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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