Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0J61_06374 | POLD2 | A0A1C7N8W0 | A0A1C7MZ53 | Uncharacterized protein. | DNA polymerase delta small subunit. | 0.991 |
A0J61_06374 | aste1 | A0A1C7N8W0 | A0A1C7NDD4 | Uncharacterized protein. | Protein asteroid 1. | 0.736 |
A0J61_06374 | pol3 | A0A1C7N8W0 | A0A1C7MZS8 | Uncharacterized protein. | DNA polymerase. | 0.990 |
A0J61_11113 | SNRPE | A0A1C7MWK5 | A0A1C7ND10 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.844 |
A0J61_11113 | SmF | A0A1C7MWK5 | A0A1C7NCV9 | Uncharacterized protein. | Small nuclear ribonucleoprotein F. | 0.859 |
A0J61_11113 | aste1 | A0A1C7MWK5 | A0A1C7NDD4 | Uncharacterized protein. | Protein asteroid 1. | 0.725 |
A0J61_11113 | smd1 | A0A1C7MWK5 | A0A1C7NJ28 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.841 |
A0J61_11113 | smd2 | A0A1C7MWK5 | A0A1C7NSA4 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.792 |
MUS81 | aste1 | A0A1C7NCE9 | A0A1C7NDD4 | Crossover junction endonuclease MUS81. | Protein asteroid 1. | 0.750 |
MUS81 | mph1_1 | A0A1C7NCE9 | A0A1C7N821 | Crossover junction endonuclease MUS81. | ATP-dependent DNA helicase mph1. | 0.999 |
MUS81 | pol3 | A0A1C7NCE9 | A0A1C7MZS8 | Crossover junction endonuclease MUS81. | DNA polymerase. | 0.791 |
POLD2 | A0J61_06374 | A0A1C7MZ53 | A0A1C7N8W0 | DNA polymerase delta small subunit. | Uncharacterized protein. | 0.991 |
POLD2 | aste1 | A0A1C7MZ53 | A0A1C7NDD4 | DNA polymerase delta small subunit. | Protein asteroid 1. | 0.797 |
POLD2 | pol3 | A0A1C7MZ53 | A0A1C7MZS8 | DNA polymerase delta small subunit. | DNA polymerase. | 0.999 |
SNRPE | A0J61_11113 | A0A1C7ND10 | A0A1C7MWK5 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.844 |
SNRPE | SmF | A0A1C7ND10 | A0A1C7NCV9 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein F. | 0.999 |
SNRPE | aste1 | A0A1C7ND10 | A0A1C7NDD4 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Protein asteroid 1. | 0.759 |
SNRPE | smd1 | A0A1C7ND10 | A0A1C7NJ28 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
SNRPE | smd2 | A0A1C7ND10 | A0A1C7NSA4 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
SmF | A0J61_11113 | A0A1C7NCV9 | A0A1C7MWK5 | Small nuclear ribonucleoprotein F. | Uncharacterized protein. | 0.859 |
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