STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_04239Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
TONSL
Tonsoku-like protein.
   
 0.708
A0J61_11797
SH3 domain-containing protein.
    
 0.576
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.563
mysm1_0
Histone H2A deubiquitinase MYSM1.
    
 0.498
mysm1_1
Histone H2A deubiquitinase MYSM1.
    
 0.498
pmt3
Ubiquitin-like protein pmt3/smt3.
    
 0.492
eaf3
Chromatin modification-related protein eaf3.
    
 0.483
EAF3
Chromatin modification-related protein EAF3.
    
 0.483
ykoW
Signaling protein YkoW.
    
 0.482
A0J61_00408
GRIP domain-containing protein.
    
 0.470
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.