STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gid4_1Glucose-induced degradation protein 4. (280 aa)    
Predicted Functional Partners:
Armc8
Armadillo repeat-containing protein 8.
    
 
 0.919
ranbp9
Ran-binding protein 9.
    
 
 0.795
RANBP10_1
Ran-binding protein 10.
    
 
 0.795
RANBP10_0
Ran-binding protein 10.
    
 
 0.795
A0J61_03723
LisH domain-containing protein C29A3.03c.
    
 
 0.768
A0J61_07056
Fructose-1,6-bisphosphatase, cytosolic; Belongs to the FBPase class 1 family.
    
 
 0.755
wdr26
WD repeat-containing protein 26.
    
 
 0.713
SSH4
Protein SSH4.
    
 
 0.605
ssh4_0
Protein ssh4.
    
 
 0.605
A0J61_04938
Uncharacterized protein.
    
 
 0.605
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.