STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX14Peroxisomal membrane protein PER10. (309 aa)    
Predicted Functional Partners:
PEX19-1
Peroxisome biogenesis protein 19-1.
    
 0.994
PEX13_0
Peroxisomal membrane protein PAS20.
   
 0.985
PEX13_1
Peroxisomal membrane protein PAS20.
   
 0.985
POX18_1
Oleate-induced peroxisomal protein POX18.
    
 0.984
PEX5
Peroxisomal targeting signal 1 receptor.
   
 0.983
PAY32
Peroxisomal targeting signal receptor.
   
 0.983
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
    
 0.980
Eci2
Enoyl-CoA delta isomerase 2, mitochondrial.
    
 0.980
Ephx2
Bifunctional epoxide hydrolase 2.
   
 
  0.974
Acad10
Acyl-CoA dehydrogenase family member 10.
   
 
  0.974
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.