STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dao1_1D-amino-acid oxidase. (349 aa)    
Predicted Functional Partners:
DAD4
DASH complex subunit DAD4.
  
 0.904
AGX1
Alanine--glyoxylate aminotransferase 1.
  
 
 0.797
trp-3
Tryptophan synthase.
    
 0.789
DYR_0
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
    
 0.776
AIFM2_2
Apoptosis-inducing factor 2.
   
 0.768
aifA
Apoptosis-inducing factor A.
   
 0.768
aifB
Apoptosis-inducing factor B.
   
 0.768
AIFM1
Apoptosis-inducing factor 1, mitochondrial.
   
 0.768
AIFM2_1
Apoptosis-inducing factor 2.
   
 0.768
Sqrdl
Sulfide:quinone oxidoreductase, mitochondrial.
   
 0.768
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.