STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_04892Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
trx1_0
Thioredoxin; Belongs to the thioredoxin family.
    
 0.672
trx1_1
Thioredoxin; Belongs to the thioredoxin family.
    
 0.672
TONSL
Tonsoku-like protein.
    
 0.465
hulA
E3 ubiquitin-protein ligase.
    
 
 0.464
pub1_0
E3 ubiquitin-protein ligase pub1.
    
 
 0.464
Txn2
Thioredoxin; Belongs to the thioredoxin family.
    
 0.441
A0J61_08099
Thioredoxin domain-containing protein.
    
 0.424
TMX1
Thioredoxin-related transmembrane protein 1.
    
 0.424
PDIL2-2
Protein disulfide-isomerase like 2-2.
    
 0.424
PDI_0
Protein disulfide-isomerase.
    
 0.424
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.