STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPP10U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (589 aa)    
Predicted Functional Partners:
IMP3
U3 small nucleolar ribonucleoprotein IMP3.
   
  0.999
IMP4
U3 small nucleolar ribonucleoprotein IMP4.
   
 0.999
wdr75
WD repeat-containing protein 75.
   
 0.999
Wdr43
WD repeat-containing protein 43.
   
 0.999
SPBC3B8.09
Uncharacterized protein C3B8.09.
   
 
 0.999
utp4
U3 small nucleolar RNA-associated protein 4.
   
 0.999
nop14
Putative nucleolar complex protein 14.
   
 
 0.998
HEATR1
HEAT repeat-containing protein 1.
   
 0.998
nop58
Nucleolar protein 58.
   
 0.998
nol6
U3 small nucleolar RNA-associated protein 22.
   
 0.998
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.