STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mirBSiderophore iron transporter mirB. (599 aa)    
Predicted Functional Partners:
A0J61_04289
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.527
A0J61_05021
Uncharacterized protein.
    
   0.495
mrp4
37S ribosomal protein mrp4, mitochondrial.
    
   0.495
mrpl10
54S ribosomal protein L10, mitochondrial.
   
   0.492
A0J61_01181
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A.
    
 
 0.489
rpmJ
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.488
mrpl38
54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.488
rpsR
30S ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.488
mrpl7
Putative 54S ribosomal protein L7, mitochondrial.
    
 
 0.486
rpsK
30S ribosomal protein S11.
    
 
 0.486
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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