Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0J61_01181 | mirB | A0A1C7NTF1 | A0A1C7NKR0 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A. | Siderophore iron transporter mirB. | 0.489 |
A0J61_04289 | mirB | A0A1C7NG02 | A0A1C7NKR0 | AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | Siderophore iron transporter mirB. | 0.527 |
A0J61_04289 | rpsK | A0A1C7NG02 | A0A1C7NG07 | AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 30S ribosomal protein S11. | 0.687 |
A0J61_05021 | mirB | A0A1C7NHW5 | A0A1C7NKR0 | Uncharacterized protein. | Siderophore iron transporter mirB. | 0.495 |
A0J61_05021 | mrp4 | A0A1C7NHW5 | A0A1C7NQM2 | Uncharacterized protein. | 37S ribosomal protein mrp4, mitochondrial. | 0.939 |
A0J61_05021 | mrpl10 | A0A1C7NHW5 | A0A1C7NFN1 | Uncharacterized protein. | 54S ribosomal protein L10, mitochondrial. | 0.950 |
A0J61_05021 | mrpl38 | A0A1C7NHW5 | A0A1C7NGI2 | Uncharacterized protein. | 54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. | 0.941 |
A0J61_05021 | mrpl7 | A0A1C7NHW5 | A0A1C7N6B7 | Uncharacterized protein. | Putative 54S ribosomal protein L7, mitochondrial. | 0.945 |
A0J61_05021 | rpmJ | A0A1C7NHW5 | A0A1C7N2P0 | Uncharacterized protein. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.942 |
A0J61_05021 | rpsK | A0A1C7NHW5 | A0A1C7NG07 | Uncharacterized protein. | 30S ribosomal protein S11. | 0.938 |
A0J61_05021 | rpsR | A0A1C7NHW5 | A0A1C7NSB7 | Uncharacterized protein. | 30S ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family. | 0.931 |
mirB | A0J61_01181 | A0A1C7NKR0 | A0A1C7NTF1 | Siderophore iron transporter mirB. | NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A. | 0.489 |
mirB | A0J61_04289 | A0A1C7NKR0 | A0A1C7NG02 | Siderophore iron transporter mirB. | AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.527 |
mirB | A0J61_05021 | A0A1C7NKR0 | A0A1C7NHW5 | Siderophore iron transporter mirB. | Uncharacterized protein. | 0.495 |
mirB | mrp4 | A0A1C7NKR0 | A0A1C7NQM2 | Siderophore iron transporter mirB. | 37S ribosomal protein mrp4, mitochondrial. | 0.495 |
mirB | mrpl10 | A0A1C7NKR0 | A0A1C7NFN1 | Siderophore iron transporter mirB. | 54S ribosomal protein L10, mitochondrial. | 0.492 |
mirB | mrpl38 | A0A1C7NKR0 | A0A1C7NGI2 | Siderophore iron transporter mirB. | 54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. | 0.488 |
mirB | mrpl7 | A0A1C7NKR0 | A0A1C7N6B7 | Siderophore iron transporter mirB. | Putative 54S ribosomal protein L7, mitochondrial. | 0.486 |
mirB | rpmJ | A0A1C7NKR0 | A0A1C7N2P0 | Siderophore iron transporter mirB. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.488 |
mirB | rpsK | A0A1C7NKR0 | A0A1C7NG07 | Siderophore iron transporter mirB. | 30S ribosomal protein S11. | 0.486 |
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