STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fip1Plasma membrane iron permease. (368 aa)    
Predicted Functional Partners:
FET5
Iron transport multicopper oxidase FET5.
  
 
 0.806
fio1
Iron transport multicopper oxidase fio1; Belongs to the multicopper oxidase family.
  
 
 0.800
AAO_1
L-ascorbate oxidase.
   
 
 0.738
ASO
L-ascorbate oxidase; Belongs to the multicopper oxidase family.
   
 
 0.738
AAO_2
L-ascorbate oxidase; Belongs to the multicopper oxidase family.
   
 
 0.738
HEPHL
Hephaestin-like protein; Belongs to the multicopper oxidase family.
   
 
 0.692
Hephl1
Hephaestin-like protein 1.
   
 
 0.692
AAO_0
L-ascorbate oxidase.
   
 
 0.692
PLA2G4A
Lysophospholipase.
    
 0.687
SKN7_0
Transcription factor SKN7.
    
 0.589
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.