Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0J61_01323 | prz1_0 | A0A1C7NNA5 | A0A1C7NML4 | Uncharacterized protein. | Transcriptional regulator prz1. | 0.614 |
A0J61_08851 | TONSL | A0A1C7N1W3 | A0A1C7NFJ6 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Tonsoku-like protein. | 0.741 |
A0J61_08851 | mit1 | A0A1C7N1W3 | A0A1C7N793 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Chromatin remodeling factor mit1. | 0.548 |
A0J61_08851 | prz1_0 | A0A1C7N1W3 | A0A1C7NML4 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Transcriptional regulator prz1. | 0.608 |
A0J61_08851 | ruvbl1 | A0A1C7N1W3 | A0A1C7NDZ6 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.992 |
LAMTOR2 | prz1_0 | A0A1C7N6T6 | A0A1C7NML4 | Ragulator complex protein LAMTOR2. | Transcriptional regulator prz1. | 0.611 |
NIA1 | TONSL | A0A1C7NAU0 | A0A1C7NFJ6 | Nitrate reductase [NADH] 1. | Tonsoku-like protein. | 0.843 |
NIA1 | prz1_0 | A0A1C7NAU0 | A0A1C7NML4 | Nitrate reductase [NADH] 1. | Transcriptional regulator prz1. | 0.772 |
TONSL | A0J61_08851 | A0A1C7NFJ6 | A0A1C7N1W3 | Tonsoku-like protein. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.741 |
TONSL | NIA1 | A0A1C7NFJ6 | A0A1C7NAU0 | Tonsoku-like protein. | Nitrate reductase [NADH] 1. | 0.843 |
TONSL | mit1 | A0A1C7NFJ6 | A0A1C7N793 | Tonsoku-like protein. | Chromatin remodeling factor mit1. | 0.498 |
TONSL | mrp4 | A0A1C7NFJ6 | A0A1C7NQM2 | Tonsoku-like protein. | 37S ribosomal protein mrp4, mitochondrial. | 0.470 |
TONSL | prz1_0 | A0A1C7NFJ6 | A0A1C7NML4 | Tonsoku-like protein. | Transcriptional regulator prz1. | 0.684 |
mit1 | A0J61_08851 | A0A1C7N793 | A0A1C7N1W3 | Chromatin remodeling factor mit1. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.548 |
mit1 | TONSL | A0A1C7N793 | A0A1C7NFJ6 | Chromatin remodeling factor mit1. | Tonsoku-like protein. | 0.498 |
mit1 | prz1_0 | A0A1C7N793 | A0A1C7NML4 | Chromatin remodeling factor mit1. | Transcriptional regulator prz1. | 0.646 |
mit1 | ruvbl1 | A0A1C7N793 | A0A1C7NDZ6 | Chromatin remodeling factor mit1. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.805 |
mrp4 | TONSL | A0A1C7NQM2 | A0A1C7NFJ6 | 37S ribosomal protein mrp4, mitochondrial. | Tonsoku-like protein. | 0.470 |
mrp4 | prz1_0 | A0A1C7NQM2 | A0A1C7NML4 | 37S ribosomal protein mrp4, mitochondrial. | Transcriptional regulator prz1. | 0.608 |
mrp4 | rpsK | A0A1C7NQM2 | A0A1C7NG07 | 37S ribosomal protein mrp4, mitochondrial. | 30S ribosomal protein S11. | 0.999 |
page 1 of 2